Low Complexity Regions for mm10
收藏DataCite Commons2020-09-04 更新2024-07-25 收录
下载链接：
https://figshare.com/articles/dataset/Low_Complexity_Regions_for_mm10/1180124/1
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资源简介：
Li showed that variant calling is unreliable in low-complexity regions in human. These are low-complexity regions for mouse (mm10). Created with the following code (mm10 fasta from UCSC): REF=mm10.fa wget ftp://occams.dfci.harvard.edu/pub/bio/tgi/software/seqclean/seqclean_x86_64.tar.gz tar xzvf seqclean_x86_64.tar.gz ./seqclean/bin/mdust \<br>$REF -c \<br>| awk 'BEGIN{OFS="\t"}{ print $1,$3-1,$4 }' | gzip -c - > LCR-mm10.bed.gz
提供机构：
figshare
创建时间：
2016-01-19
