Additional file 3: of RNA-Seq analysis of resistant and susceptible sub-tropical maize lines reveals a role for kauralexins in resistance to grey leaf spot disease, caused by Cercospora zeina

Expression levels, protein annotation and GO annotation of differentially expressed genes. Statistically significant differentially expressed genes between the two genotypes are reported. The Log2FC derived from the comparisons of the fragments per kilobase of transcript per million fragments mapped (FPKM) expression values of RIL165 vs RIL387 is depicted. For each gene, the putative annotation of the protein according to the RefSeq database (provided by the National Center for Biotechnology Information (NCBI), www.ncbi.nlm.nih.gov/refseq/ ), Uniprot (Universal Protein Resource; www.uniprot.org ) and GenBank sequence database (provided by the NCBI, www.ncbi.nlm.nih.gov/genbank/ ) is described. Gene ontology terms mapped to each gene by AgriGo are included, in addition to the chromosomal positions of the genes in v2 of the B73 reference genome. Where the DE gene overlapped with the genomic position of a disease severity QTL [21, 50] this was indicated (XLSX 564 kb)