Data from: Use of a natural hybrid zone for genome-wide association mapping of craniofacial traits in the house mouse

Phenotype_CraniofacialShapeThe file contains the skull and mandible shape and size data. Centroid size (CS) and principal components (PC) were standardized to have mean=0 and standard deviation =1. Data was obtained after analyzing raw landmark coordinates in MorphoJ.KinshipMatrixCentered kinship matrix generated in GEMMA using all LD-pruned SNPssample.data_noVinonoNA1_FstALL_5MAF.txtHYBS.sorted.pruned_allMarkers.cXX.txtSNPdata.bedBed file generated in PLINK using the LD-pruned SNPs.sample.data_noVinonoNA1_FstALL_5MAF.txtHYBS.sorted.pruned.bedSNPdata.bimBim file generated in PLINK using all LD-pruned SNPssample.data_noVinonoNA1_FstALL_5MAF.txtHYBS.sorted.pruned.bimSNPdata.famFam file generated in PLINK using all the LD-pruned SNPssample.data_noVinonoNA1_FstALL_5MAF.txtHYBS.sorted.pruned.famOriginalSNPdata.map.map file with the original set of SNPs previous to LD-pruningsample.data_noVinonoNA1_FstALL_5MAF.txtHYBS.sorted_plk.mapOriginalSNPdata.ped.ped file with the original set of SNPs previous to LD-pruningsample.data_noVinonoNA1_FstALL_5MAF.txtHYBS.sorted_plk.ped