Sequence File 2: FASTA of Aligned NACHT Domain Only
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Sequence File 2: FASTA sequence alignment file. Sequences for NOD2 were collected on Ensembl and trimmed to just the NACHT domain using HMMER and aligned in AliView. Contains aligned protein coding sequences for the NACHT domain within the NOD2 sequence for 15 fish species: Blue Tilapia (<i>Oreochromis</i> <i>aureus</i>), Bluefin Tuna (<i>Thunnus thynnus</i>), Atlantic Mackerel (<i>Scomber</i> <i>scombrus</i>), Ballan Wrasse (<i>Labrus</i> <i>bergylta</i>), Clownfish (<i>Amphiprion</i> <i>ocellaris</i>), Zebrafish (<i>Danio</i> <i>rerio</i>), Brown Trout (<i>Salmo</i> <i>trutta</i>), Channel Catfish (<i>Ictalurus</i> <i>punctatus</i>), Goldfish (<i>Carassius</i> <i>auratus</i>), Japanese Medaka (<i>Oryzias</i> <i>latipes</i>), Atlantic Salmon (<i>Salmo</i> <i>salar</i>), Chinook Salmon (<i>Oncorhynchus</i> <i>tshawytscha</i>), Coho Salmon (<i>Oncorhynchus</i> <i>kisutch</i>), Atlantic Herring (<i>Clupea</i> <i>harengus</i>), and Barramundi/Asian Seabass (<i>Lates</i> <i>calcarifer</i>).
提供机构:
figshare
创建时间:
2025-03-15



