Additional file 7: of Comprehensive transcriptomic analysis of heat shock proteins in the molecular subtypes of human breast cancer

HSPs differential gene expression between tumour tissues. The values were determined by EdgeR ANOVA-like method performed on 20,531 genes from BRCA TCGA. Only HSPs values are showed. Each column includes log2 fold change values for all comparison, log2 mean counts per million (logCPM), F-statistic and corresponding p-values and FDR values. The conditions compared are Luminal A vs. Luminal B, Luminal A vs. HER2, Luminal A vs. Basal-like, Luminal B vs. HER2, Luminal B vs. Basal-like and HER2 vs. Basal-like. Comparison between HSP-Clusts were also considered, namely HSP-Clust I vs. HSP-Clust II, HSP-Clust I vs HSP-Clust III and HSP-Clust II vs. HSP-Clust III. (XLSX 35 kb)