Analysis archive for "Reference choice governs apparent cortical-organoid fidelity in cross-study genomic contrasts"

Analysis archive "Reference choice governsapparent cortical-organoid fidelity in cross-study genomic contrasts". Contains the compact derived effect tables, dataset and cohort manifests,SHA-256 checksum ledger, figure source data and figure-generation code,frozen configuration and seeds, computational execution records, and thesubmission-ready manuscript. Analyses were produced with RefGauge v0.2.0 (10.5281/zenodo.21794556),built from commit 5db6b33a199ac3bf73c97cb9564bf6224446c75a. Derived and descriptive artifacts only. No participant-level raw human dataare redistributed; primary sources are cited by accession and remain in theiroriginal repositories under those repositories' terms. Absolute machine paths in the frozen audit records are replaced by portable tokens; see README.md in the archive.