Additional file 1: of GOexpress: an R/Bioconductor package for the identification and visualisation of robust gene ontology signatures through supervised learning of gene expression data

Script used to perform the analysis shown in the paper. The script includes preparation of local gene and GO annotations, the main analysis, the computation of permutation-based P-values, the filtering of GO terms, and the various visualisation functions at both gene and GO levels. (R 4 kb)