Fragaria mitogenomes coding and noncoding regions alignment

The datasets are sequence alignment files of protein coding genes, introns and intergenic regions from 13 Fragaria mitochondrial genomes. The CDS data comprises 29 protein-coding genes shared by all Fragaria mitogenomes (excluding sdh4), the intronic data comprises 13 of the 14 cis-spliced introns (excluding nad1i4 in which matR is located), and the intergenic data comprises the homologous noncoding sequence with constraints of a minimal syntenic block length is 1 kb. Multinucleotide Variations(MNVs) were found in these alignment, so we also removed the MNVs from the three datasets.In the files without MNVs, we added the ancestor sequences of internal branches: IntNode23: (((F. daltoniana, F. corymbosa), (F. gracilis, F. tibetica)), (F. pentaphylla, F. nubicola)); IntNode15: (F. iturupensis, F.chiloensis); IntNode20: (F. daltoniana, F. corymbosa); IntNode21: (F.gracilis, F. tibetica); IntNode22: ((F. daltoniana, F. corymbosa), (F.gracilis, Ftibetica)); IntNode16: (F.orientalis, F. moschata); IntNode17: (F.mandschurica, F. viridis)