Genetic data for wheat biparental mapping populations
收藏Research Data Australia2025-12-20 收录
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https://researchdata.edu.au/genetic-wheat-biparental-mapping-populations/3952421
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Whole genome sequencing data for the four parents of two biparental mapping populations as well as wheat DArTseq (1.0) low coverage marker data for recombinant inbred lines and parents.\n\nParents for cross C3:\nMaternal line: 263:ZWB18\t(FRET2*2/BRAMBLING//MESIA/3/BECARD/4/HUIRIVIS #1*2/MURGA/5/BECARD/FRNCLN)\nPaternal line: VIXEN (MACE/IGW3119)\n\nParents for cross C4:\nMaternal line: 4:ZIG18 (KACHU/BECARD//WBLL1*2/BRAMBLING)\nPaternal line: 70:ZIF14 (KARAWAN-1//BOW #1/FENGKANG 15/3/MOUKA-4)\n\n\nLineage: Whole genome sequencing data were generated using Illumina sequencing 150bp Paired End reads. Image analysis was performed in real time by the NovaSeq Control Software (NCS) v1.3.1.59007 and Real Time Analysis (RTA) v4.29.3, running on the instrument computer. RTA performs real-time base calling on the NovaSeq instrument computer. Then the Illumina DRAGEN BCL Convert 07.031.732.4.3.6 pipeline was used to generate the sequence data.\n\n\nDArTseq (1.0) data provides markers in SilicoDArT Format: SilicoDArTs are scored in a binary fashion, representing genetically "dominant" markers, with "1"=Presence and "0"=Absence of a restriction fragment with the marker sequence in genomic representation of the sample. \n\nSingle nucleotide polymorphism (SNP) data are also scored in 1 and 2-row formats.\n\nMarker positions are aligned against the RefSeq v2.1 Chinese Spring reference genome.\n
提供机构:
Commonwealth Scientific and Industrial Research Organisation



