Data from: Rapid and accurate taxonomic classification of insect (Class Insecta) cytochrome c oxidase subunit 1 (COI) DNA barcode sequences using a naïve Bayesian classifier

Canadian benthos Fasta filesFasta files for the benthos insect datasets from Fredericton, New Brunswick, Canada: 1) ~ 100 bp fragments (454), 2) ~ 200 bp fragments (454), 3) ~ 600 bp reference (Sanger) sequences.CanadianBenthosFastas.zipTraining the naive Bayesian classifierContains the Fasta and taxonomy files needed to train the Ribosomal Database Project naive Bayesian classifier three different ways: 1) GenBank-genus, 2) GenBank-barcode, 3) GenBank-family.TrainingTheClassifier.zipCustomizing the Insecta taxonomy used with the classifierContains three tab-delimited taxonomy files that can be used to help customize the taxonomic scheme used by the naive Bayesian classifier: 1) GenBank-genus, 2) GenBank-barcode, 3) GenBank-family. One of these files, should be used with one of the two provided Perl scripts to generate a taxonomy file in the format required by the Ribosomal Database Project naive Bayesian classifier during training: 1) make_NBC_taxonomy.plx, 2) make_NBC_taconomy_family.plx.CustomizingInsectaTaxonomy.zipMalaise insect datasetFasta file of Malaise insect data set, see also Gibson et al. (in prep).malaise.fasta