Database S1 - ASVs significantly impacted by chemical stressor treatments
收藏NIAID Data Ecosystem2026-05-01 收录
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https://zenodo.org/record/11063836
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资源简介:
In the study by Wasimuddin et al. 2024 (https://www.biorxiv.org/content/10.1101/2024.04.20.590402v1), we identified Amplicon Sequence Variants (ASVs) that differed significantly in mean relative abundance due to the chemical stressor treatments. We performed differential abundance analysis with DESeq2, i.e. between Ctr-As, Ctr-Bx, Ctr-Tb using negative binomial-based Wald tests (P≤0.05). The individual ASVs can be retrieved in the Database S1, which consists of a R object that can be easily imported in R and further used for downstream analyses as follows.
```library(DESeq2)DatabaseS1 <- readRDS("DatabaseS1.RDS")names(DatabaseS1)DatabaseS1[1]```
创建时间:
2024-04-25



