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Detection of CRISPR-Cas9 off-target activity using amplification-free long read sequencing

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NIAID Data Ecosystem2026-03-12 收录
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https://www.ncbi.nlm.nih.gov/sra/SRP252669
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A crucial part of any CRISPR-Cas9 genome editing experiment is to design a guide RNA (gRNA) that specifically binds to the target of interest, while not binding to any unintended off-target sites. However, accurate prediction of CRISPR-Cas9 off-target sites is challenging. In this study, we developed new methods for Nanopore (OTS-Nano) and SMRT sequencing (OTS-SMRT) based detection of off-target sites. The methods were applied to study gRNA binding and CRISPR-Cas9 activity in human DNA samples and cells.
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2020-10-01
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