SDM-Genomic-Datasets

These datasets are generated from cosmic mutation dataset in COSMIC database (GRCh37, version90) with the purpose of evaluating available ontology-based Data Integration engines.They include datasets with different number of records (10k, 100k, 1 million, and 10 million records), attributes (2-15), and duplicated values (25-75 percent of duplicated records and each duplicated value being repeated 10/20 times). The details of generation of these datasets can be found in the papers where they have been used in empirical evaluation: https://doi.org/10.1145/3340531.3412881 and 10.5281/zenodo.3993657Also, the examples of mapping rules to integrate these datasets are available in https://github.com/SDM-TIB/SDM-RDFizer-Experiments/tree/master/cikm2020/experiments/mappings

本数据集源自COSMIC数据库中的宇宙突变数据集（GRCh37版本90），旨在评估基于本体论的数据集成引擎的可用性。该数据集包含不同记录数量（10k、100k、100万和1000万条记录）、属性（2-15个）以及重复值（25%-75%的记录重复，每个重复值重复10/20次）。关于这些数据集生成的详细信息，可参考其在实证评估中所使用的论文：https://doi.org/10.1145/3340531.3412881 和 10.5281/zenodo.3993657。此外，映射规则的示例，用于集成这些数据集，可在以下链接找到：https://github.com/SDM-TIB/SDM-RDFizer-Experiments/tree/master/cikm2020/experiments/mappings