Species tree from MPEST

Dryad2017-01-01 更新2026-04-13 收录

系统发育推断

物种树时间校准

数据链接：

http://datadryad.org/resource/doi:10.5061/dryad.r43s0/2 数据链接链接失效反馈

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资源简介：

Time-calibrated species tree using MPEST for topological inference and MCMCtree for the time

创建时间：

2017-01-01

Phylogeny inference under time-decaying migration and varying information content

系统发育推断

基因流模型比较

Postspeciation gene flow is widespread across the Tree of Life but is ignored as a cause of gene tree discordance under the standard multispecies coalescent. Failure to account for migration can lead

DataONE2024-09-20 更新90

Summary of simulated fixed-tree data inference.

系统发育推断

非参数贝叶斯

Posterior distribution quantile summaries for BNPR-PS with no covariates (model: {γ(t)}, first row) and BNPR-PS with an ordinary covariate (model: {γ(t), −t}, second and third rows).

NIAID Data Ecosystem60

Marginal likelihood estimation and Bayes Factor (BF) comparison for the UK 2019 dataset.

进化模型选择

系统发育推断

Maximum likelihood estimation (MLE) was obtained for combinations of molecular clocks and demographic models using the Path sampling (PS) and Stepping-stone (SS) sampling and compared using Bayes Fact

Figshare2025-06-09 更新30

the alignment and tree files of phylogenetic analysis

系统发育推断

进化树构建

the alignment and tree files of phylogenetic analysis

Figshare2019-06-26 更新90

The behavior of Metropolis-coupled Markov chains when sampling rugged phylogenetic distributions

系统发育推断

MCMC优化

Bayesian phylogenetic inference involves sampling from posterior distributions of trees, which sometimes exhibit local optima, or peaks, separated by regions of low posterior density. Markov chain Mon

NIAID Data Ecosystem40

Species tree from MPEST

资源简介：

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