Additional file 2 of BEDwARS: a robust Bayesian approach to bulk gene expression deconvolution with noisy reference signatures

Additional file 2: Table S2. Differential gene expression analysis for DPD deficiency. The summary of differential gene expression analysis using Limma package for bulk, pseudo-bulk, and deconvolved cell type or pairs of cell types (CN-NEU, CBC-INTER) expression profiles (“DGE”). Top 200 DE genes per cell type or pairs of cell types are listed in “Top 200 DE genes per cell type” sheet.