Pepper regeneration capacity analysis
收藏NIAID Data Ecosystem2026-05-02 收录
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https://data.mendeley.com/datasets/vrm6fw6j38
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资源简介：
Samples (with description):
94: NonDe (Nondedifferention)；8: ExDe (Excessive dedifferentiation)；19C-1: NorDe (Normal dedifferentiation)；19C-2: AbDi (Abnormal differentiation)；19C-3: NorDi (Normal differentiation).
Each sample was repeated 3 times, and each duplicate is represented as: samples name-1/2/3.
Abstract
(1) The eukaryotic reference transcriptomic (RNA-seq) analysis of 18 samples was completed, and a total of 115.53 Gb of Clean Data was obtained, and the Clean Data of each sample reached 5.70 Gb, and the percentage of Q30 bases was 92.98% or above.
(2) The Clean Reads of each sample were sequentially compared with the specified reference genome. Variable splicing prediction analysis, gene structure optimization analysis and discovery of new genes were performed. 18,520 new genes were discovered, of which 14,755 were functional annotation.
(3) In this project, Fold Change≥2 and FDR<0.01 were used as differential gene screening criteria.
创建时间：
2025-01-10
