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Human immunodeficiency virus 1 Targeted Locus (loci)

NIAID Data Ecosystem2026-04-25 收录

HIV-1准种

病毒深度测序

数据链接：

https://www.ncbi.nlm.nih.gov/sra/SRP172748 数据链接链接失效反馈

官方服务：

资源简介：

Targeted deep sequencing of HIV-1 from plasma of infected individuals enrolled in the RV314 cohort

应用场景：

创建时间：

2019-12-31

病毒深度测序

病毒基因分析

Multiplexed deep sequencing of high priority virus stocks including Zaire ebolavirus, human respiratory syncytial virus, canine distemper virus, measles virus, vesicular stomatitis virus, La Crosse vi

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Analysis of Zike virus variants after passage in animal models

Zika病毒变异分析

病毒深度测序

Genomic sequence data generally is limited to the dominant, “consensus”, sequence, however, because RNA viruses exist within a host as genetically diverse “mutant spectra” viral phenotype is affected

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S1 File -

耐药性突变分析

病毒深度测序

Fig A: Overview of amplicon locations. Reference amplicon sizes (incl. adapters and MIDs) are as follows: (A) RTP1 = 419 bp, RTP2 = 510 bp, RTP3 = 400 bp, RTP4 = 599 bp, RTP5 = 558 bp, RTP6 = 434 bp;

NIAID Data Ecosystem30

Optimized SMRT-UMI protocol produces highly accurate sequence datasets from diverse populations â application to HIV-1 quasispecies

HIV-1准种

单分子实时测序

Pathogen diversity resulting in quasispecies can enable persistence and adaptation to host defenses and therapies. However, accurate quasispecies characterization can be impeded by errors introduced d

DataONE2023-12-07 更新60

Visualization of SARS-CoV-2 infection dynamic

病毒深度测序

细胞感染动态分析

Deep sequencing of SARS-CoV-2 samples

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