Data supporting Homologous Point Transformer for Multi-modality Prostate Image Registration

The data set for this project was obtained from the Medical College of Wisconsin. All patients were recruited prospectively with institutional review board approval (Medical College of Wisconsin Internal 75 Review Board - PRO00022426) and written consent. Patients were scheduled for radical prostatectomy with clinical MR scans acquired approximately 2 weeks prior to surgery. The prostate tissue was formalin fixed, and a custom slicing jig derived from the MR scans was created to obtain histology/MR slice correspondence. Whole mount prostate slides were stained with H&amp;E (hematoxylin and eosin) and imaged on a microscope slide scanner (captured using 40x objective at 0.58 µm/px and subsequently downsampled). Manually-curated homologous control points were placed for all slides in the selected data set to act as ground truth. <br> The data is organized such that each patient (sample) has their own top level folder. Individual slice subfolders are included within each patient. Slice sequence coorospondance to physical orientation was not enforced for this dataset. Each slice subfolder contains: - The downsampled histology image (512x512x3) - The full field T2 weighted MR slice (512x512x1) - The manually placed homologous points (columns 1,2 - histology | columns 3,4 - MRI)