遇见数据集

Metagenome-assembled genomes (MAGs) from size-fractionated metagenomes of the Western Pacific Ocean water column

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Zenodo2026-08-14 更新2026-08-20 收录
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This dataset contains 1,515 metagenome-assembled genomes (MAGs) recovered from 76 size-fractionated metagenomic samples spanning the epipelagic to abyssal zones of the Western Pacific Ocean (WPO). MAGs are provided as FASTA (.fa) files. Quality tiers: 664 near-complete, 556 high-quality, 295 medium-quality. Taxonomic classification via GTDB r226. Samples were collected along a 5°N–21°N transect and separated into particle-attached (PAM, >3 µm) and free-living (FLM, 0.22–3 µm) fractions across four pelagic zones (epipelagic, mesopelagic, bathypelagic, abyssal). Associated publication: Sharma et al. "Genome-resolved metagenomics reveals functional divergence between particle-attached and free-living microbiomes across the water column of the Western Pacific Ocean." Raw metagenomic sequencing reads are available in the NCBI Sequence Read Archive under BioProject accession PRJNA1510864.

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Zenodo
创建时间:
2026-08-14
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