five

Additional file 12 of Probabilistic ancestry maps: a method to assess and visualize population substructures in genetics

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https://figshare.com/articles/dataset/Additional_file_12_of_Probabilistic_ancestry_maps_a_method_to_assess_and_visualize_population_substructures_in_genetics/7819034
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5-fold cross-validated recall for twenty 1000 Genomes Project populations (19 classes) using SVM, PCA or GTM. Recall of optimized models for the following algorithms: SVM 10 PCs = support vector machine classification model using 10 principal components, PCA 8-NN = k-nearest neighbours model based on 2D PCA map (k = 8), GTM 3 or 10 PCs = bayesian classification model based on generative topographic mapping using 3 or 10 principal components. File name: recall_crossvalidation_19classes.html. (HTML 8 kb)
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2019-03-08
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