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Transcriptome analysis of sus1 mutant in reference to its parental wild type reference
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TALEN gene knockouts reveal no requirement for the shelterin protein Rap1 in telomere protection and length regulation. Homo sapiens
Gene expression of human knockouts of telomere-protein Rap1 were compared to their wildtype counterparts in mutliple cell lines (available from the ATCC repository). We discovered that Rap1, desite be
NIAID Data Ecosystem30
Transcriptome comparison between Bacillus cereus ATCC 10987 cells with and without iron starvation
In this study we compared the transcriptomic profiles of cells grown in BHI, BHI supplemented with FeCl3, BHI supplemented with iron scavenger Bipyridine and both iron and the scavenger. Liquid cultur
NIAID Data Ecosystem20
Next Generation Sequencing Facilitates Quantitative Analysis of db/m and db/db bone marrow derived LSK (Lineage negative Sca1-ckit positive cells) Transcriptomes I
The Lin-Sca1+c-Kit+ (LSK) fraction of the bone marrow (BM) comprises multipotent hematopoietic stem cells (HSCs), which are vital to tissue homeostasis and vascular repair. While diabetes affects HSC
NIAID Data Ecosystem10
Technical and biological variance structure in mRNA-Seq data. Homo sapiens
mRNA expression data from next generation sequencing platforms is obtained in the form of counts per gene or exon. Counts are generally assumed to follow a Poisson distribution in which the variance i
NIAID Data Ecosystem20
Meta-Analysis of Genetic Programs between Idiopathic Pulmonary Fibrosis and Sarcoidosis
Background Idiopathic pulmonary fibrosis (IPF) and pulmonary sarcoidosis are typical interstitial lung diseases with unknown etiology that cause lethal lung damages. There are notable differences betw
NIAID Data Ecosystem10
