Results of IMC-Denoise: a content aware pipeline to enhance Imaging Mass Cytometry

Generated training sets:

training_set_supp_table6.zip

training_set_supp_table7.zip

training_set_supp_table8.zip

training_set_supp_table9.zip

training_set_supp_table10.zip

training_set_supp_table11.zip

Trained weights of experimental data:

training_result_supp_table7.zip

training_result_supp_table8.zip

training_result_supp_table9.zip

training_result_supp_table10.zip

training_result_supp_table11.zip

Simulation results:

Simulation_results.zip

Experimental results:

Human_bone_marrow_IMC_denoising_results.zip

Human_breast_cancer_IMC_denoising_results.zip

Human_pancreatic_cancer_IMC_denoising_results.zip

MIBI_denoising_results.zip

Ilastik-processed results:

DIMR_Ilastik_results.zip

background_removal_results.zip

Extracted single cell data and the corresponding phenotyping results:

single_cell_analysis.zip