MOESM1 of Selecting sequence variants to improve genomic predictions for dairy cattle

Additional file 1. List of variants from Run 5 of the 1000 Bull Genomes Project used in Tests 1, 2 and 3. All edited variants are listed with 1 or 0 in the final three columns indicating if the variant was used in Test 1, 2 or 3. Fields included are VariantName, Chromosome, Location, VariantType, Test_1, Test_2, and Test_3 in a space delimited file. Variant types use the 3-character codes EXN = exonic, SPL = splice site, UTR = untranslated region, UPS = upstream, DNS = downstream, SNP = other intronic or intergenic SNP, and IND = InDel.