Fusarium graminearum raw data
收藏资源简介:
Supplementary data 2 – Fusarium graminearum raw data (Alphafold3, metapredict, InterProScan, Foldseek, fasta, gff, and summary of structural changes) Fgram_structural_changes.csv - a list of all proteins with their new and old identifiers. Also includes ‘random_id’ which are used to identify new models in the fasta, gff, interproscan and metapredict results. F_gram_PH-1_old.tar.gz and F_gram_PH-1_new.tar.gz - zip files of raw Alphafold3 results for new and old models. Ensure you have at least 100Gb of free space per tar.gz file before uncompressing. F_gram_PH-1_foldseek_pdb_results.tar.gz - raw foldseek results for new and old models. Foldseek was run with the PDB database. Old_FgraminearumPH1_FungiDB-68_changed_proteins-0.8-filtered-renamed-METAPREDICT.csv and New_Fusarium_graminearum_26_07_2024-0.8-filtered-renamed-METAPREDICT.csv - raw Metapredict3 results for new and old models. Old_FgraminearumPH1_FungiDB-68_changed_proteins_INTERPROSCAN.tsv and New_Fusarium_graminearum_26_07_2024-INTERPROSCAN.tsv - raw InterProScan results for new and old models. Old_FungiDB-68_FgraminearumPH-1.gff and New_Fusarium_graminearum_26_07_2024.gff3 - gff files for new and old proteins. Old_FgraminearumPH1_FungiDB-68_changed_proteins.fasta and New_Fusarium_graminearum_26_07_2024.fasta - protein fasta files for new and old models



