MOESM3 of Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa

Figshare2011-06-16 更新2026-04-29 收录

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https://figshare.com/articles/dataset/MOESM3_of_Deep_sequencing_on_genome-wide_scale_reveals_the_unique_composition_and_expression_patterns_of_microRNAs_in_developing_pollen_of_Oryza_sativa/10041212 数据链接链接失效反馈

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Additional file 3: Small RNA sequences perfectly matching predicted novel miRNA hairpins. (TXT 170 KB)

创建时间：

2011-06-16

Novel and Conserved microRNAs in soybean floral whorls

植物microRNA

大豆研究

MicroRNAs (miRNAs) are a class of endogenous small non-coding RNAs (19â24 nt) that regulates de gene expression, mainly through mRNA targets cleavage and translation inhibition. In plants, miRNAs ha

NIAID Data Ecosystem110

Additional file 4 of Deciphering the dynamic gene expression patterns of pollen abortion in a male sterile line of Avena sativa through transcriptome analysis at different developmental stages

植物雄性不育分子机制

花粉发育转录组学

Additional file 4: Supplementary Table 4. Expression levels of meiosis-related genes and superoxide-related genes.

Figshare2021-02-18 更新70

we performed microRNA deep sequencing, analyzed the microRNAs and revealed the function of the corresponding target genes, as the first step to understanding the role of microRNAs in S. officinarum. 268 candidate miRNAs were screened from sequencing microRNA library with the total RNA from sugarcane leaves using the RNA-seq ESTs of all tissue of Saccharum officinarum from our group， public sugarcane ESTs from NCBI and the reference sorghum genome from Phytozome V9. After further analysis, 43 homologous miRNAs and 9 novel miRNAs were identified. Out of the 52 miRNAs, 6 were randomly chosen and verified by qRT-PCR and the putative miRNA targets’ function was analyzed. The identification of miRNAs and their targets not only will enable to understand the roles of miRNAs in sugarcane development and growth, but also enhances the understanding of miRNA-dependent mechanisms in highly polyploid species. Identification and Characterization of microRNAs from Saccharum officinarum L by deep s

植物microRNA

甘蔗基因组

In modern sugarcane cultivars, around 70-80% of the genetic information originates from Saccharum officinarum, which contributed important sugar content traits. Although several studies have identifie

NIAID Data Ecosystem30

Additional file 1: of Identification and characterisation of microRNAs and their target genes in phosphate-starved Nicotiana benthamiana by small RNA deep sequencing and 5â RACE analysis

植物microRNA

磷胁迫响应

Table S1. Microsoft Excel Worksheet (.xlsx). sRNA deep sequencing read matches to predicted pri-miRNA hairpins. Table S2. Computationally predicted miRNA targets in N. benthamiana. Table S3. Top targe

Figshare2018-12-18 更新90

Reproductive transcriptome of Nicotiana tabacum male gametophyte unveils decreasing number of new transcription factors during pollen ontogeny

花粉发育转录组学

植物生殖发育分子调控

Plants with highly reduced male gametophytes represent a successful adaptation to sexual reproduction, which plays an important role in the colonization and radiation of terrestrial ecosystems. During

NIAID Data Ecosystem40

MOESM3 of Deep sequencing on genome-wide scale reveals the unique composition and expression patterns of microRNAs in developing pollen of Oryza sativa

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