Erinaceus europaeus (Hedgehog May 2012 EriEur2.0/eriEur2)

High confidence set 442 tRNAs decoding standard 20 AA 441 Selenocysteine tRNAs (TCA) 1 Notable atypical predictions Anticodon/isotype mismatch 3 Unexpected anticodons 1 Non-canonical anticodon loop length 1 Other tRNA-like predictions Primary filter (tRNAscan-SE pseudogenes) 5559 Secondary filter (low feature scores, possible rep. element) 1149 Tertiary filter (excessive isotype copies, possible rep. element) 25 Ser AGA 1 Arg TCT 4 Leu CAA 5 Ile TAT 4 Tyr GTA 12 Isotype tRNA Count by Anticodon Total Ala AGC 14 GGC CGC 4 TGC 8 26 Gly ACC GCC 14 CCC 5 TCC 8 27 Pro AGG 10 GGG CGG 3 TGG 4 17 Thr AGT 8 GGT CGT 4 TGT 5 17 Val AAC 7 GAC CAC 3 TAC 6 16 Isotype tRNA Count by Anticodon Total Ser AGA 8 GGA CGA 3 TGA 3 ACT GCT 7 21 Arg ACG 6 GCG CCG 3 TCG 4 CCT 7 TCT 5 25 Leu AAG 6 GAG CAG 6 TAG 3 CAA 5 TAA 1 21 Isotype tRNA Count by Anticodon Total Phe AAA GAA 8 8 Asn ATT GTT 6 6 Lys CTT 123 TTT 10 133 Asp ATC GTC 13 13 Glu CTC 9 TTC 8 17 His ATG GTG 5 5 Gln CTG 8 TTG 4 12 Isotype tRNA Count by Anticodon Total Ile AAT 8 GAT CAT TAT 4 12 iMet/Met CAT 8/7 15 Tyr ATA GTA 12 12 Supres TCA CTA TTA 0 Cys ACA GCA 31 31 Trp CCA 7 7 SelCys TCA 1 1