Underlying raw data used for generating Fig 2.
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https://figshare.com/articles/dataset/Underlying_raw_data_used_for_generating_Fig_2_/13354712
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Expression values (FPKM) of all the 21,135 genes in root, flower, petiole, trap, rim, glands, and trigger hair, as well as pairwise differential expression log2FC values of each comparison (trigger hair vs. each of all the other tissues) that pass a threshold of BH p-adjusted value < 0.001 are shown. The Shannon entropy calculated Hgene-value, and Qgene|hair-values for the trigger hair is also shown. All the genes are annotated according to the Mercator 3.6 annotation tool including A. thaliana homologs and gene names together with their description. All the transcripts have been blasted against the Aramemnon plant membrane protein database; therefore, transportome members have been annotated accordingly. Bona fide trigger hair–specific genes identified by a combination of both methods (Shannon entropy together with the differential expression analysis—see Materials and methods section) are marked in red and ordered by Qgene|hair-value. An additional FPKM > 20 filter for the trigger hair expression level shows only the highly expressed genes that are also trigger hair specific. BH, Benjamini–Hochberg; FPKM, Fragments Per Kilobase of transcript per Million mapped reads; NA, not assigned.
(XLSX)
创建时间:
2020-12-09



