Dataset S1 - Fructose-Asparagine Is a Primary Nutrient during Growth of Salmonella in the Inflamed Intestine

Transposon Site Hybridization data from germ-free mice and germ-free mice monoassociated with Enterobacter Cloacae. As explained more fully in the Materials and Methods, a normalized Log2 ratio of output/input hybridization intensity was determined for each replicate. Insertion mutants where the ORF is essential for survival were selected against, and thus yielded a negative ratio in the probes adjacent to the insertion point. Conversely, insertion mutants that were advantageous to growth in the output samples yielded a positive ratio. The average ratio for all probes and all replicates for each locus are shown in the spreadsheet for germ-free mice and germ-free mice monoassociated with Enterobacter cloacae. The difference column shows the difference of the ratios for that locus between the two mouse groups to facilitate the identification of differentially required genes. The spreadsheet has two tabs, one sorted by locus tag and one sorted by difference. (XLSX)