Genetic diversity indices and relatedness computed for the <i>Holothuria scabra</i> populations sampled.

Parameters calculated include the effective population size by the linkage disequilibrium method (NeLD; 95% confidence intervals indicated within brackets), mean number of alleles per locus (A), standardised private allelic richness (Ap, MAF ≥5%): The total number of loci with private alleles detected per population is shown in bold, effective number of alleles (Neff), number of locally common alleles (MAF ≥5%) found in <50% of all 6 populations tested, percentage of polymorphic loci, observed heterozygosity (Ho), average expected heterozygosity corrected for population sample size (Hn.b.), inbreeding coefficients (Fis) and average individual multi-locus heterozygosity (MLH). All computations were generated using a dataset containing 6,896 genome-wide SNPs.