Conservation gene set enrichment analysis results.

Shown are the results of the conservation gene set enrichment analysis performed on gene expression data from 24, 48, and 72 hours in culture. These analyses were performed using gene sets based on transcription factor motifs in regions conserved between the chicken and frog genomes. The gene sets shown here were downloaded from the BROAD Institute website and represent empirically defined sets of genes. References for each gene set are provided in the text. Italicized are those gene sets with p-value <0.05 and false discovery rate (FDR) <0.25, which are taken as significant. Gene sets are directly as they appear in the Molecular Signatures Database on the Broad Institute website.