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资源简介：
Pu'an chicken resequencing
应用场景：
创建时间：
2023-09-28
相关数据集
Identical-by-Descent analysis of Pea-comb haplotypes from three different breeds in comparison with wild-type haplotypes.
The observed SNP allele frequencies are given. The alleles defining the minimum shared haplotype among Pea-comb birds is indicated in bold italics. *The SNP marker names are defined in Table S1. **n =
NIAID Data Ecosystem60
Additional file 2: of A new chicken 55K SNP genotyping array
The second group of SNPs which related to the economic traits. The locus and the p-value of SNPs which related to 15 economic traits were provided. (XLSX 998 kb)
NIAID Data Ecosystem50
Dataset S2
Dataset S2 – Summary of Pacific samples from this study plus those from Storey et al. (1, 25, 26) without the use of Shrimp DNase, and the presence of the ancient haplotypes in modern chicken populati
Figshare2014-01-09 更新20
Imputed WGS data of 626 birds
Genotype imputation was performed with two-step approach from 55 to 600 K, and then imputed to WGS. Before Genotype imputation, pre-phasing was executed in Beagle 4.1 with default parameter (Browning
NIAID Data Ecosystem60
List of whole genome resequenced datasets available on Sequence Read Archive, European Nucleotide Archive or chickenSD for Gallus gallus and used in this study.
Local chickens that do not confer to a breed are labelled as “village”. (XLSX)
Figshare2023-01-19 更新30
