Input, output, and explanatory files for Veridical
收藏f1000.figshare.com2023-06-02 更新2025-01-21 收录
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资源简介:
VeridicalOutExample.xls: contains the output for the variant within RAD54L, along with descriptions of the terms used and the output format.
all.vin: contains the full set of input variants for Veridical used in this paper.
allTumoursBAMFileList.txt: The list of BAM files for the RNASeq data of the breast tumour samples analyzed. This contains TCGA file UUIDs, followed by a slash, followed by the file names themselves.
allNormalsBAMFileList.txt: The list of BAM files for the RNASeq data of the normal samples corresponding to these tumors. This contains TCGA file UUIDs, followed by a slash, followed by the file names themselves.
all.vout: The full Veridical output produced when running Veridical with all.vin.
VeridicalOutExample.xls:包含RAD54L变体输出,以及所用术语的描述和输出格式说明。
all.vin:包含本文中用于Veridical的完整输入变体集。
allTumoursBAMFileList.txt:分析乳腺癌样本RNASeq数据的BAM文件列表。其中包含TCGA文件UUID,其后跟斜杠,然后是文件名本身。
allNormalsBAMFileList.txt:对应上述肿瘤的正常样本RNASeq数据的BAM文件列表。其中包含TCGA文件UUID,其后跟斜杠,然后是文件名本身。
all.vout:运行Veridical时使用all.vin生成的完整Veridical输出。
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