食管癌数据分析

食管癌是指发生在食管上皮组织的恶性肿瘤，是全球范围内较为常见的恶性肿瘤之一。本产品提供DNA、RNA的分析流程以及单细胞的分析流程。其中DNA包含点突变、结构变异、融合分析、CNV变异分析。RNAseq除了基因表达差异外，还包括新转录本发现、等位基因特异性表达、转录本和非编码RNA的相互作用。单细胞分析包括细胞类别鉴定、细胞间通讯、单细胞轨迹分析、转录因子的分析。

Esophageal cancer is a malignant tumor originating from the epithelial tissue of the esophagus, and is one of the most common malignant tumors worldwide. This product provides DNA, RNA, and single-cell analysis workflows. Specifically, the DNA analysis workflow covers single nucleotide variants (SNVs), structural variants (SVs), fusion gene analysis, and copy number variation (CNV) analysis. For RNA-seq analysis, in addition to differential gene expression analysis, it also includes de novo transcript discovery, allele-specific expression (ASE) analysis, and the interaction between transcripts and non-coding RNAs. Single-cell analysis includes cell type identification, intercellular communication analysis, single-cell trajectory analysis, and transcription factor (TF) analysis.

搜集汇总

背景与挑战

背景概述

该数据集提供食管癌的DNA、RNA和单细胞分析流程，涵盖点突变、结构变异、基因表达差异等多种分析内容，由上海芯超数据科技有限公司提供。