Identifying changes in the reproduction number, rate of spread, and doubling time during the course of the COVID-19 outbreak whilst accounting for potential biases due to delays in case reporting both
Inferring epidemiological parameters such as the R0 from time-scaled phylogenies is a timely challenge. Most current approaches rely on likelihood functions, which raise specific issues that range fro
The generation time is presented in days. A range of possible generation times is shown when multiple estimations were made. The confidence interval (CI) is given wherever possible. A median latent pe
