Grayling draft genome dataset
收藏NIAID Data Ecosystem2026-03-10 收录
下载链接：
https://figshare.com/articles/dataset/Grayling_draft_genome_dataset/5135257
下载链接
链接失效反馈官方服务：
资源简介：
###### Description
Tthymallus_scaffolds.fasta-Assembled scaffold sequences
Tthymallus_RepeatLibrary_deNovo.fasta-De novo repeat library sequences
Tthymallus_transcriptome_DeNovo.fasta- De novo transcriptome assembly using Trinity (followed by RSEM based filtering)
Tthymallus_transcriptome_ReferenceBased.fasta-Reference-based transcriptome using STAR-Cufflinks-transdecoder pipeline (followed by filtering based on homology to known proteins from zebrafish and stickleback proteins.
Tthymallus_ScaffoldAnnotation.gff3-MAKER pipeline based annotation for the scaffolds.
Tthymallus_proteins.fasta-Grayling protein sequences used for inferring orthologous groups (based on MAKER annotations)
Tthymallus_maker_fullOutput.gff- Full output from MAKER
Tthymallus_CPMcounts.txt-Expression counts for grayling
OrthologousGroups.txt-Inferred orthologous groups using Orthofinder
创建时间：
2017-06-22
