Descriptions of immune and inflammation associated gene co-expression modules.

Each module was divided into submodules in which each member gene’s expression was positively or negatively correlated with the module's eigengene (denoted kME+ and kME-, respectively). For each module, we provide the number of transcripts assigned to each submodule, the top DAVID annotation clusters for each submodule (parenthesis shows the-log10 of the average enrichment P value for all annotations in the cluster), the top enriched biological processes determined using ToppCluster (parenthesis shows the-log10 of the FDR-adjusted P value), the enrichment of established transcription factor binding sites in each submodule (TFBS; parenthesis shows the-log10 of the FDR-adjusted P value; performed using ToppCluster), and the enrichment score of a set of IFN-stimulated genes (see Methods; enrichment score is the-log10 of the FDR-adjusted P value).
Descriptions of immune and inflammation associated gene co-expression modules.