A complete list of bHLH genes from giant panda.

Note: Giant panda bHLH genes were named according to their mouse homologues. Bootstrap values were from in-group phylogenetic analyses with mouse bHLH motif sequences using NJ, MP, and ML algorithms, respectively. OsRa (the rice bHLH motif sequence of R family) was used as the outgroup in every constructed tree except those for GpHen1 and GpBmal2 which used separate outgroup sequence. n/m means that a giant panda bHLH does not form a monophyletic group with any other single bHLH motif sequence. n/m* means that a giant panda bHLH does not form a monophyletic clade with any specific bHLH motif sequence but forms a monophyletic clade with other bHLH proteins of the same family.ameans that the gene's orthology was defined by in-group phylogenetic analyses with corresponding whole bHLH protein sequences from mouse. The accession numbers are from different protein resources. Those labeled as “XP” are from ‘RefSeq protein’ and those labeled as “hmm” were from ‘Ab initio protein’ databases of giant panda.