JET, iJET, and ET evaluation on chain 1n5y:A.

Predictions for DNA transferase chain 1n5y:A when 1000 or 5000 sequences are retrieved using PSI-BLAST. Best predictions are obtained with iJET (in bold) run on 5000 retrieved sequences. JET results are improved when physical-chemical properties are taken into account (compare JET-cons with JET-cons+pc). For different classes of sequence identity we report the number of sequences collected in each class after filtering. The 478 sequences retrieved by ET with BLAST have sequence identities in the range 90�C96%.