Geometric deep learning improves generalizability of MHC-bound peptide predictions

Full dataset and trained models from the manuscript "Geometric deep learning improves generalizability of MHC-bound peptide predictions". "outputs_and-BA_data.zip" contains the networks' outputs for each cross-validation experiment and a "full_dataset.csv" containing the initial BA data. "trained_models.zip" contains all the trained models parameters "propedia_ssl.zip" contains all the 3D models from propedia used to train the 3D-SSL "pdb.zip" will be uploaded soon, containing all the 3D models generated in PANDORA and used to train CNN, GNN and EGNN.