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Assessing the causes of diversification slowdowns: temperature-dependent and diversity-dependent models receive equivalent support

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NIAID Data Ecosystem2026-03-11 收录
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https://figshare.com/articles/dataset/Assessing_the_causes_of_diversification_slowdowns_temperature-dependent_and_diversity-dependent_models_receive_equivalent_support/9555842
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The zip file contains 218 time-calibrated trees of tetrapod families. There are amphibians, birds, crocodiles, mammals, squamates, and turtles. The files are Rdata files one can read and use in R as follows: attach("FamilyAmphibiaTrees.Rdata"). The phylogenies are stored in a list containing the family name, the dated tree, and the total number of species in the family. To get the tree, one can do as follows: phylo<-FamilyAmphibiaTrees[[i]][[1]], with i being the number of the family. To get the total number of species and compute the sampling fraction, one can do as follows: f<-Ntip(phylo)/as.numeric(FamilyAmphibiaTrees[[i]][[2]]).
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2019-08-12
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