Drug resistance mutations detected with bulk sequencing (plasma) and deep sequencing (PBMCs).

Samples displayed discordant genotypic data between the cell free viruses and the PBMC-viruses are marked by black dots, Major mutations are marked in boldface type, Major drug resistance mutations at prevalence >20% of the sequenced population are underlined, Major drug resistance mutations at prevalence 1Transmitted drug resistance mutation, Mutations detect only in plasma are marked by pilcrow symbol.Drug resistance mutations detected with bulk sequencing (plasma) and deep sequencing (PBMCs).