CroCoNet: a novel framework for cross-species network analysis reveals POU5F1 (OCT4) rewiring

This archive contains the scripts and data files required to reproduce the analyses presented in the manuscript "CroCoNet: a novel framework for cross-species network analysis reveals POU5F1 (OCT4) rewiring". Contents: neural_differentiation_dataset.zip: data files related to the CroCoNet analysis of the scRNA-seq dataset profiling the early neural differentiation of human, gorilla and cynomolgus macaque iPS cells validations.zip: data files related to the various validations of the CroCoNet analysis on the neural differentiation dataset brain_dataset.zip: data files related to the CroCoNet analysis of the snRNA-seq dataset profiling the middle temporal gyrus of five primate species from Jorstad et al. (2021) CroCoNet_analyses_scripts.zip: a compressed version of the GitHub repository containing the data analysis scripts CroCoNet_R_package.zip: a compressed version of the GitHub repository containing the CroCoNet R package