Reference Alignment

This file contains the details of sheep heart RNA sequencing samples and the statistical analysis relative to the sheep reference transcriptome. Details for each tab include:
All Samples- A table of sample details and statistics for the fastq or alignment analysis of each RNA sequencing sample.
Experiment 1 matrix- Salmon alignment for experiment 1 samples relative to the reference transcriptome, where values are shown as the transcripts per million (TPM).
Experiment 1 Significant Genes- The P-value for each transcript shown in Figure 2 reaching a Bonfroni-corrected significance of <0.05 and Log2 fold change >1 or <-1.
Experiment 1 ECHO-Histo Data- The animal echo and histology data for tissues processed that also have RNA sequencing data.
Experiment 1 Correlation- A Pearson correlation for the echo and histology data relative to significant transcripts of RNA sequencing.
Experiment 2 matrix- Salmon alignment for experiment 2 samples relative to the reference transcriptome, where values are shown as the transcripts per million (TPM).
Experiment 2 Significant Genes- The P-value for each transcript shown in Figure 2 reaching a Bonfroni-corrected significance of <0.05 and Log2 fold change >1 or <-1.
Experiment 3 matrix- Salmon alignment for experiment 3 samples relative to the reference transcriptome, where values are shown as the transcripts per million (TPM).
Experiment 3 Significant Genes- The P-value for each transcript shown in Figure 2 reaching a Bonfroni-corrected significance of <0.05 and Log2 fold change >1 or <-1.