Hist-8000 sequence similarity scores are closer to the ground truth than the corresponding Sum-of-learnt-Trigrams scores. (NW, Hist-8000) and (NW, Hist-SDM12) are both higher than (NW,SoT) for 10 sets of 1000 proteins sampled from Swiss-Prot [41]. close to 1 indicates a strong positive relationship between the alignment and cos. similarity scores, while values closer to zero indicate no relationship. We report mean and standard deviation of the correlations. NW: Needleman-Wunch global sequence alignment algorithm, Hist-8000: Histogram-8000, SoT: Sum-of-learnt-Trigrams, : Spearman rank correlation, Hist-SDM12: Hist-SDM12: Histogram-Structural Derived Matrix-12.
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https://figshare.com/articles/dataset/Hist-8000_sequence_similarity_scores_are_closer_to_the_ground_truth_than_the_corresponding_Sum-of-learnt-Trigrams_scores_NW_Hist-8000_and_NW_Hist-SDM12_are_both_higher_than_NW_SoT_for_10_sets_of_1000_proteins_sampled_from_Swiss-Prot_41_clos/29845899
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Hist-8000 sequence similarity scores are closer to the ground truth than the corresponding Sum-of-learnt-Trigrams scores. (NW, Hist-8000) and (NW, Hist-SDM12) are both higher than (NW,SoT) for 10 sets of 1000 proteins sampled from Swiss-Prot [41]. close to 1 indicates a strong positive relationship between the alignment and cos. similarity scores, while values closer to zero indicate no relationship. We report mean and standard deviation of the correlations. NW: Needleman-Wunch global sequence alignment algorithm, Hist-8000: Histogram-8000, SoT: Sum-of-learnt-Trigrams, : Spearman rank correlation, Hist-SDM12: Hist-SDM12: Histogram-Structural Derived Matrix-12.
创建时间：
2025-08-06
