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SI: MD and QM/MM data for publication "Ammonium complexes of orthoester cryptands are inherently dynamic and adaptive"

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Figshare2019-02-16 更新2026-04-29 收录
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https://figshare.com/articles/dataset/SI_MD_and_QM_MM_data_for_publication_Ammonium_complexes_of_orthoester_cryptands_are_inherently_dynamic_and_adaptive_/7484942
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Suporting MD and QM/MM setup data and analysis for "Ammonium complexes of orthoester cryptands are inherently dynamic and adaptive"- MD-QMMM-InputStructuresandTopologies:containing all topologies (*.top), starting coordinates (*.crd), toplogy creation files ([xleap].in), and structures including atomic point charges (*.mol) for all simulations- MDcontainingtruncated trajectories (.nc), ptraj analysis files: average structures (.pdb), rmsd, rmsf, hbonding, energetic analysis files- umbrellacontaining truncated trajectories, output, and analysis files (wham etc) for umbrella sampling - QMMMumbrellacontaining truncated trajectories, output, and analysis files (wham etc) for QM/MM umbrella sampling
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2019-02-16
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