MINUTE-ChIP example data

This collection contains an example MINUTE-ChIP dataset to run minute pipeline on, provided as supporting material to help users understand the results of a MINUTE-ChIP experiment from raw data to a primary analysis that yields the relevant files for downstream analysis along with summarized QC indicators.
Example primary non-demultiplexed FASTQ files provided here were used to generate GSM5493452-GSM5493463 (H3K27m3) and GSM5823907-GSM5823918 (Input), deposited on GEO with the minute pipeline all together under series GSE181241.
For more information about MINUTE-ChIP, you can check the publication relevant to this dataset:
Kumar, Banushree, et al. "Polycomb repressive complex 2 shields naïve human pluripotent cells from trophectoderm differentiation." Nature Cell Biology 24.6 (2022): 845-857.
If you want more information about the minute pipeline, there is a public biorXiv and a GitHub repository and official documentation.

本集合包含一个 MINUTE-ChIP 数据集的示例，旨在运行分钟级管道，并作为辅助材料提供，以帮助用户理解从原始数据到初步分析的全过程，该分析生成后续分析所需的相关文件以及总结的质量控制指标。本例中提供的初级非多路复用 FASTQ 文件被用于生成 GSM5493452-GSM5493463（H3K27m3）和 GSM5823907-GSM5823918（输入），这些数据已存档于 GEO，并在系列 GSE181241 下使用 minute pipeline 一同提交。欲了解更多关于 MINUTE-ChIP 的信息，请参阅与本数据集相关的出版物：Kumar, Banushree, 等人. "Polycomb 抑制复合体 2 保护原始人类多能干细胞免受滋养层分化." 自然细胞生物学 24.6 (2022): 845-857。如需获取关于 minute pipeline 的更多信息，可以查阅公开的 biorXiv 和 GitHub 仓库以及官方文档。