Mini reproducibility package for a response-geometry framework separating microbiome movement magnitude from directional coherence

This record contains a cleaned mini reproducibility package supporting the manuscript “A response-geometry framework separates microbiome movement magnitude from directional coherence in intervention studies” by Szeto and Kwan. The package includes manuscript-aligned scripts, derived summaries, simulation parameter specifications, checksums, supplementary support files, and documentation for the response-geometry analyses. Original public datasets are not redistributed in this record and should be accessed through the source accessions and publications cited in the manuscript. This package is provided for research reproducibility and peer-review assessment. It is not a validated clinical, diagnostic, predictive, regulatory, efficacy, or mechanistic software tool. Access to files is restricted during journal submission and peer review to protect manuscript-aligned simulation and reproducibility materials before editorial assessment is complete. Access can be granted to editors and reviewers for peer-review purposes. The files will be made publicly available upon acceptance or before publication, after final safety and licensing checks.