Temporal effect of cover crop use on soil microbiome in a irrigated vineyard under semi-arid climate

This dataset includes 16S rRNA gene and ITS region sequencing data from soil samples collected over three years in a vineyard managed with different cover crop treatments. The sequences provide a resource for examining bacterial and fungal communities in distinct vineyard zones (interrow and vine row) under Semi-arid climate conditions at the San Joaquin Valley, California, USA. These genomic data enable further investigations into microbial diversity and community structure influenced by agricultural management practices.