Additional file 2: Table S1. of Small RNA and degradome profiling reveals miRNA regulation in the seed germination of ancient eudicot Nelumbo nucifera

Detailed information of the known miRNAs identified in sacred lotus during seed germination. Table S2. Detailed information of the novel miRNAs identified from sacred lotus during seed germination. Table S3. The expression level of all known miRNAs of the germinating seeds at 0 h, 12 h, 24 h, 36 h and 72 h. Table S4. The significantly differential expression level of the known miRNAs of the germinating seeds at 12 h, 24 h, 36 h and 72 h in comparison with 0 h. Table S5. The targets of known miRNA identified in sacred lotus during the seed germination. Table S6. The targets of novel miRNA predicted in sacred lotus during the seed germination. Table S7. GO enrichment analysis for all the target genes. Table S8. KEGG pathway enrichment analysis for the targets of differentially expressed miRNAs. Table S9. The common and specific miRNA editing in sacred lotus during the seed germination. Table S10. Primers of miRNAs and targets in sacred lotus for qRT-PCR and miRNA editing in this study. (XLSX 203 kb)