290 Genomes from the Mediterranean Sea: Supplemental Data
收藏Figshare2018-11-20 更新2026-04-08 收录
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https://figshare.com/articles/dataset/290_Genomes_from_the_Mediterranean_Sea_Supplemental_Data/3545330/4
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This dataset has been updated which you can read about here: https://bjtully.github.io/posts/2018/10/re-visiting-tmed-mags/ !!!! To accommodate that update, there is a new set of files added to this page:TMED.UpdatedRecords.xlsx - compares original genome completion statistics with new versions and identified source of changeTMED.UpdatedContigs.tar.gz - which contains the new genome contigs for the updated genomes<br>A series of data files for the tentatively titled "290 Metagenome-assembled Genomes from the Mediterranean Sea: a resource for marine microbiology" by Benjamin Tully, Elaina Graham, Rohan Sachdeva, and John Heidelberg at the University of Southern California. Data files include, all contigs from Minimus2 + Megahit output used for binning and community assessment, ≥2kb and ≥7.5kb; contig read counts per sample; the putative genome contigs and Prodigal-predicted nucleotide and protein putative CDS FASTA files; the ribosomal marker HMM profiles; reference genome markers; high quality genome markers; low completion bins, and contigs without a bin.
创建时间:
2018-11-20



